STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717475_00192Unannotated protein. (382 aa)    
Predicted Functional Partners:
GCA_000717475_00193
Unannotated protein.
 
     0.954
GCA_000717475_00191
Unannotated protein.
 
    0.941
GCA_000717475_00194
Unannotated protein.
 
     0.923
GCA_000717475_00195
Unannotated protein.
 
     0.921
GCA_000717475_03492
Unannotated protein.
   
   0.912
GCA_000717475_01677
Unannotated protein.
  
  
 0.749
GCA_000717475_00587
Unannotated protein.
  
  
 0.725
GCA_000717475_00196
Unannotated protein.
       0.564
GCA_000717475_03079
Unannotated protein.
   
 
 0.555
GCA_000717475_00888
Unannotated protein.
 
    0.551
Your Current Organism:
Desulfonatronum thiodismutans
NCBI taxonomy Id: 159290
Other names: ATCC BAA-395, D. thiodismutans, DSM 14708, Desulfonatronum sp. MLF1, Desulfonatronum thiodismutans Pikuta et al. 2003, strain MLF-1, strain MLF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.