STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY91632.1Hook-length control protein FliK. (465 aa)    
Predicted Functional Partners:
SDY91450.1
Flagellar motor switch protein FliN/FliY.
 
  
 0.999
SDY91608.1
Flagellar basal-body rod modification protein FlgD.
  
 
 0.991
SDY91717.1
Flagellar assembly protein FliH.
 
  
 0.989
SDY91737.1
Flagellar motor switch protein FliG.
 
  
 0.987
SDY91753.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.986
SDY91697.1
Type III secretion system ATPase, FliI/YscN.
  
  
 0.984
SDY91676.1
Flagellar FliJ protein.
  
  
 0.981
SDY91479.1
Flagellar motor switch protein FliM.
 
  
 0.980
SDY91568.1
Flagellar hook protein FlgE.
  
 
 0.977
fliE
Flagellar hook-basal body complex protein FliE.
  
  
 0.976
Your Current Organism:
Tindallia californiensis
NCBI taxonomy Id: 159292
Other names: ATCC BAA-393, CIP 107910, DSM 14871, T. californiensis, Tindallia californiensis Pikuta et al. 2003, Tindallia sp. APO, strain APO
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.