STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ03722.1Ribose-binding protein. (318 aa)    
Predicted Functional Partners:
SDZ03741.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.999
SDY98021.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 0.998
SDY26965.1
Hypothetical protein.
 
 0.996
SDY51003.1
Hypothetical protein.
 
 0.993
SDY75373.1
PAS domain S-box-containing protein.
 
 0.990
SDZ03754.1
Ribose transport system ATP-binding protein/methyl-galactoside transport system ATP-binding protein.
 0.989
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.989
SDY51077.1
PAS domain S-box-containing protein.
 
 0.988
SDY51146.1
PAS domain S-box-containing protein.
 
 0.988
SDY65903.1
Two-component system, NarL family, sensor histidine kinase EvgS.
 
 0.986
Your Current Organism:
Tindallia californiensis
NCBI taxonomy Id: 159292
Other names: ATCC BAA-393, CIP 107910, DSM 14871, T. californiensis, Tindallia californiensis Pikuta et al. 2003, Tindallia sp. APO, strain APO
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.