STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cusBProbable copper RND efflux membrane fusion protein, CzcB family; Function of homologous gene experimentally demonstrated in an other organism; transporter; Biologicalprocesses : Excrete; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (490 aa)    
Predicted Functional Partners:
czcC
Metal RND efflux outer membrane protein, CzcC family; Function experimentally demonstrated in the studied genus; factor; Biologicalprocesses : Excrete.
 0.999
cusA
Probable copper efflux transporter, CzcA family; Function of homologous gene experimentally demonstrated in an other organism; transporter; Biologicalprocesses : Excrete; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.999
cusF
Probable exported copper efflux protein; Function of homologous gene experimentally demonstrated in an other organism; factor; Biologicalprocesses : Excrete.
 
 0.997
czcA-I
Cation efflux system protein; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transport and binding proteins; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.946
czcA-II
Cation efflux system protein; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transport and binding proteins; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.946
pvdT
Pyoverdine efflux carrier and ATP binding protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.877
PP_5733
Putative metal-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
      0.860
czcC-I
Cobalt-zinc-cadmium resistance protein; Function of strongly homologous gene; transporter; Transport and binding proteins.
 
 
 0.855
czcC-II
Cobalt-zinc-cadmium resistance protein; Function of strongly homologous gene; transporter; Transport and binding proteins.
 
 
 0.855
PP_0588
Putative copper-binding chaperone; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; Biologicalprocesses : Circulate.
     
 0.751
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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