STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kamALysine 2,3-aminomutase. (441 aa)    
Predicted Functional Partners:
lysA
Diaminopimelate decarboxylase.
     
 0.743
KXK12726.1
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.
    
 0.696
KXK16224.1
Putative methylamine corrinoid protein.
    
 0.574
KXK11438.1
Hypothetical protein.
    
 0.574
KXK16065.1
Aspartokinase; Belongs to the aspartokinase family.
    
 0.531
KXK14218.1
Putative agmatinase; Belongs to the arginase family.
       0.495
KXK12067.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 
 0.464
KXK14216.1
Hypothetical protein.
       0.455
KXK14219.1
Acetyltransferase (GNAT) family protein.
       0.407
Your Current Organism:
Chloroflexi bacterium OLB14
NCBI taxonomy Id: 1617415
Other names: C. bacterium OLB14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.