STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK27428.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
KXK27429.1
LVIVD repeat protein.
       0.773
KXK27430.1
Hypothetical protein.
       0.608
KXK27431.1
Hypothetical protein.
       0.608
epsF_1
Type II secretion system protein F.
       0.608
epsE_1
Type II secretion system protein E.
       0.608
KXK27434.1
Putative major pilin subunit.
       0.434
Your Current Organism:
candidate division WS6 bacterium OLB20
NCBI taxonomy Id: 1617426
Other names: c. division WS6 bacterium OLB20
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