STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK68102.1Hypothetical protein. (113 aa)    
Predicted Functional Partners:
KMK68101.1
Putative integral membrane protein; PFAM: Heavy-metal resistance.
 
     0.923
KMK68103.1
RNA polymerase, sigma subunit, ECF family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
       0.854
KMK68104.1
Hypothetical protein.
 
     0.669
KMK67186.1
PFAM: Protein of unknown function (DUF3154).
  
     0.488
KMK68105.1
PFAM: Protein of unknown function (DUF983).
       0.484
KMK66545.1
Hypothetical protein.
  
     0.474
KMK68106.1
NTP pyrophosphohydrolase; PFAM: NUDIX domain.
       0.452
KMK67676.1
Hypothetical protein.
  
     0.423
KMK67162.1
PFAM: Bacterial regulatory proteins, luxR family; Autoinducer binding domain.
  
     0.413
KMK67089.1
PFAM: Glycosyl transferase family 2.
  
     0.408
Your Current Organism:
Puniceibacterium sp. IMCC21224
NCBI taxonomy Id: 1618204
Other names: P. sp. IMCC21224
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