STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK63894.1PFAM: CagE, TrbE, VirB family, component of type IV transporter system; AAA-like domain; TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family. (792 aa)    
Predicted Functional Partners:
KMK63893.1
PFAM: Type IV secretory pathway, VirB3-like protein.
 
 
 0.985
KMK63900.1
Type IV secretory pathway, component VirB8; PFAM: VirB8 protein.
 
 
 0.981
KMK63902.1
Type IV secretory pathway, VirB10 component; PFAM: Bacterial conjugation TrbI-like protein.
 
 
 0.980
KMK63901.1
PFAM: Conjugal transfer protein; TIGRFAM: P-type conjugative transfer protein VirB9.
 
 0.977
KMK63899.1
Type IV secretory pathway, VirB6 component; PFAM: TrbL/VirB6 plasmid conjugal transfer protein.
 
 
 0.976
KMK63897.1
PFAM: Type IV secretion system proteins.
 
     0.948
KMK63903.1
P-type DNA transfer ATPase VirB11; Part of the Type IV secretion system. Belongs to the GSP E family.
  
 0.933
KMK63896.1
Transglycosylase family protein; PFAM: Transglycosylase SLT domain.
 
   
 0.932
KMK64714.1
Type IV secretory pathway, VirB10 component; PFAM: Bacterial conjugation TrbI-like protein.
 
 
 0.930
KMK64131.1
Type IV secretory pathway, VirB10 component; PFAM: Bacterial conjugation TrbI-like protein.
 
 
 0.930
Your Current Organism:
Puniceibacterium sp. IMCC21224
NCBI taxonomy Id: 1618204
Other names: P. sp. IMCC21224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.