STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ95423.1Alpha-amylase. (417 aa)    
Predicted Functional Partners:
KKQ95420.1
Hypothetical protein.
 
 
 0.980
KKQ95424.1
Glycogen synthase.
 
 
  0.965
KKQ95426.1
Glycogen phosphorylase.
  
 
  0.853
KKQ95422.1
Glycogen synthase.
 
 
  0.827
KKQ95419.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Belongs to the sulfur carrier protein TusA family.
    
  0.821
KKQ93281.1
Sugar-phosphate nucleotidyltransferase.
    
  0.791
KKQ92973.1
Phosphomannomutase.
    
  0.782
KKQ94847.1
HAD-superfamily hydrolase, subfamily IA, variant 3.
    
  0.781
KKQ95421.1
Hypothetical protein.
       0.496
Your Current Organism:
candidate division CPR2 bacterium GW2011GWC23910
NCBI taxonomy Id: 1618345
Other names: c. division CPR2 bacterium GW2011_GWC2_39_10, candidate division CPR2 bacterium GW2011_GWC2_39_10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.