STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ95224.1YjeF-related protein. (308 aa)    
Predicted Functional Partners:
KKQ93954.1
Leucine-tRNA ligase.
  
 0.999
KKQ92908.1
ATP-dependent RNA helicase RhlE.
  
 0.999
KKQ95225.1
tRNA/rRNA methyltransferase (SpoU).
   
 
 0.925
KKQ94183.1
Phosphoribosylformylglycinamidine synthase.
    
  0.879
KKQ94949.1
Hypothetical protein.
  
 
 0.843
KKQ95294.1
Ribonucleoside-diphosphate reductase.
     
 0.680
recO
Repair protein RecO protein; Involved in DNA repair and RecF pathway recombination.
 
     0.612
glmS
Isomerizing Glutamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
  
  
 0.605
KKQ93283.1
60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. Belongs to the chaperonin (HSP60) family.
  
   0.603
KKQ92975.1
60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. Belongs to the chaperonin (HSP60) family.
  
   0.603
Your Current Organism:
candidate division CPR2 bacterium GW2011GWC23910
NCBI taxonomy Id: 1618345
Other names: c. division CPR2 bacterium GW2011_GWC2_39_10, candidate division CPR2 bacterium GW2011_GWC2_39_10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.