STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ71719.1Hypothetical protein. (256 aa)    
Predicted Functional Partners:
KKQ70418.1
Hypothetical protein.
  
     0.713
KKQ71720.1
Hypothetical protein.
 
     0.709
KKQ71716.1
Hypothetical protein.
       0.634
KKQ71717.1
Penicillin-binding protein, 1A family.
       0.634
KKQ71718.1
Hypothetical protein.
       0.634
KKQ68547.1
Hypothetical protein.
  
     0.582
KKQ69615.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
     0.535
KKQ70421.1
Hypothetical protein.
  
     0.522
KKQ71721.1
Hypothetical protein.
       0.459
KKQ71722.1
Hypothetical protein.
       0.459
Your Current Organism:
Shapirobacteria bacterium GW2011GWE23830
NCBI taxonomy Id: 1618490
Other names: C. Shapirobacteria bacterium GW2011_GWE2_38_30, Candidatus Shapirobacteria bacterium GW2011_GWE2_38_30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.