STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM84113.1ATP-dependent chaperone ClpB, ATP-dependent Clp protease ATP-binding subunit ClpB. (889 aa)    
Predicted Functional Partners:
AKM83879.1
ATP-dependent Clp protease proteolytic subunit, ATP-dependent Clp protease, protease subunit.
  
 0.999
AKM84158.1
Chaperone protein DnaK, molecular chaperone DnaK.
  
 
 0.998
AKM84159.1
Chaperone protein DnaJ, molecular chaperone DnaJ.
  
 0.989
AKM83779.1
TPR domain-containing protein.
  
 0.979
AKM84157.1
GrpE protein, molecular chaperone GrpE.
  
 0.931
AKM84170.1
Topoisomerase I, DNA topoisomerase I protein.
     
 0.925
AKM84393.1
Heat shock protein Hsp20, HSP20 family protein.
  
 
 0.909
polA
Polymerase I, DNA polymerase I protein.
  
  
 0.780
AKM84142.1
RND family efflux transporter MFP subunit.
  
  
 0.780
AKM84112.1
Hypothetical protein.
  
  
 0.775
Your Current Organism:
Campbellbacteria bacterium GW2011OD13428
NCBI taxonomy Id: 1618633
Other names: C. Campbellbacteria bacterium GW2011_OD1_34_28, Candidatus Campbellbacteria bacterium GW2011_OD1_34_28, Parcubacteria (Campbellbacteria) bacterium GW2011_OD1_34_28
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