STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKW11966.1Hypothetical protein. (396 aa)    
Predicted Functional Partners:
KKW11967.1
Carbamoyltransferase.
 
     0.895
KKW11962.1
Lipopolysaccharide biosynthesis protein.
 
     0.817
KKW11961.1
UDP-N-acetylglucosamine 2-epimerase.
       0.773
KKW11963.1
Glycosyl transferase.
       0.773
KKW11964.1
Glycosyl transferase group 1.
       0.773
KKW11965.1
Hypothetical protein.
       0.773
KKW11976.1
Lipolytic enzyme, G-D-S-L family.
 
     0.768
KKW11968.1
Hypothetical protein.
       0.737
KKW11977.1
Lipolytic protein G-D-S-L family.
 
     0.730
KKW11969.1
Hypothetical protein.
       0.431
Your Current Organism:
Jorgensenbacteria bacterium GW2011GWB1499
NCBI taxonomy Id: 1618664
Other names: C. Jorgensenbacteria bacterium GW2011_GWB1_49_9, Candidatus Jorgensenbacteria bacterium GW2011_GWB1_49_9, Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9
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