STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ40947.1Hypothetical protein. (360 aa)    
Predicted Functional Partners:
frr
Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
       0.758
KKQ40261.1
Peptidase S8 and S53, subtilisin, kexin, sedolisin.
 
 
  0.742
KKQ40949.1
Glycine-tRNA ligase.
       0.710
KKQ40946.1
Polymerase III, delta prime subunit protein.
       0.694
KKQ40669.1
Aspartate aminotransferase.
    
  0.638
KKQ39471.1
Aspartate aminotransferase.
    
  0.638
KKQ40943.1
Hypothetical protein.
 
     0.573
KKQ40942.1
Hypothetical protein.
 
     0.569
KKQ40850.1
Hypothetical protein.
  
     0.526
KKQ40944.1
Cell shape determining protein, MreB/Mrl family.
       0.506
Your Current Organism:
Magasanikbacteria bacterium GW2011GWA2378
NCBI taxonomy Id: 1619036
Other names: C. Magasanikbacteria bacterium GW2011_GWA2_37_8, Candidatus Magasanikbacteria bacterium GW2011_GWA2_37_8, Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_37_8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.