STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJK11578.1Helicase SNF2; Derived by automated computational analysis using gene prediction method: Protein Homology. (1147 aa)    
Predicted Functional Partners:
KJK10583.1
DNA-directed RNA polymerase subunit omega; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.991
KJK10989.1
DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.990
KJK11030.1
DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.990
KJK13483.1
Phosphatidylinositol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.986
KJK11029.1
DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.978
KJK13883.1
Acetoin utilization protein AcuC; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.973
KJK12253.1
Recombinase RecA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.958
KJK10680.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.939
KJK12846.1
DNA polymerase III subunit beta; Binds the polymerase to DNA and acts as a sliding clamp; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.938
KJK10623.1
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.938
Your Current Organism:
Terrabacter sp. 28
NCBI taxonomy Id: 1619947
Other names: T. sp. 28
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.