STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM61105.1ABC transporter, solute-binding protein. (429 aa)    
Predicted Functional Partners:
CEM61106.1
ABC transporter, permease protein.
 
 0.991
CEM61107.1
ABC transporter, permease protein.
 
 0.966
CEM62313.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.825
CEM62991.1
ABC transporter, solute-binding protein.
  
   
 0.655
CEM63233.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.640
lplC
Protein LplC.
 
 
 0.634
CEM62957.1
Protein LplC (fragment).
 
 
 0.629
CEM62309.1
ABC transporter, permease protein.
 
 
 0.617
CEM63055.1
ABC transporter, permease protein.
 
 
 0.617
CEM60649.1
ABC transporter, permease protein.
 
 
 0.609
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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