STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ytePUncharacterized multiple-sugar transport system permease YteP. (317 aa)    
Predicted Functional Partners:
lplC
Protein LplC.
 
 0.982
CEM61287.1
ABC transporter, solute-binding protein.
 
 
 0.981
ytcP
Putative ABC transporter permease protein YtcP; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.968
CEM62957.1
Protein LplC (fragment).
 
 0.968
CEM62956.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.955
CEM62774.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.950
CEM62776.1
ABC transporter, permease protein.
  
  
 
0.918
yteP-2
Uncharacterized multiple-sugar transport system permease YteP.
  
  
 
0.908
CEM61291.1
PHP domain protein.
 
     0.569
CEM60663.1
Glycosyl hydrolase family 20, catalytic domain protein.
 
     0.557
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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