STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM61293.1ABC transporter, ATP-binding protein (fragment). (156 aa)    
Predicted Functional Partners:
CEM61225.1
Efflux ABC transporter, permease protein.
 
 0.896
CEM61226.1
Efflux ABC transporter, permease protein.
 
 0.894
CEM62607.1
Efflux ABC transporter, permease protein.
 
 
 0.693
CEM63065.1
Efflux ABC transporter, permease protein.
 
 
 0.686
CEM61450.1
ABC transporter, ATP-binding protein.
  
     0.666
CEM61214.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.645
CEM62608.1
Efflux ABC transporter, permease protein.
 
 
 0.640
CEM61611.1
Efflux ABC transporter, permease protein.
  
 
 0.568
CEM61613.1
Efflux ABC transporter, permease protein.
  
 
 0.568
CEM62599.1
Hypothetical protein; No homology to any previously reported sequences.
  
 
 0.568
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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