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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppD-2Oligopeptide transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the ABC transporter superfamily. (328 aa)    
Predicted Functional Partners:
CEM63155.1
ABC transporter, permease protein.
 
 0.999
CEM63156.1
ABC transporter, permease protein.
 0.997
CEM61411.1
ABC transporter, permease protein.
 
 0.995
CEM60619.1
ABC transporter, permease protein.
  
 0.990
CEM61410.1
ABC transporter, permease protein (fragment).
 
 0.989
CEM63157.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.977
CEM61412.1
ABC transporter, ATP-binding protein.
  
  
 
0.920
oppB
Oligopeptide transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 0.918
CEM61455.1
ABC transporter, ATP-binding protein.
 
    
0.906
lolD-2
Outer membrane-specific lipoprotein transporter subunit; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
    
0.905
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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