STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM40175.1Secreted protein. (373 aa)    
Predicted Functional Partners:
AMM40240.1
Secreted protein containing Peptidase C14, caspase catalytic domain protein.
  
 0.843
AMM41298.1
Cell division protein FtsK.
   
 
 0.780
AMM40174.1
Polysaccharide deacetylase.
    
  0.741
AMM41212.1
Carboxypeptidase regulatory-like domain protein.
    
 
 0.716
AMM40004.1
Carboxyl-terminal protease; Belongs to the peptidase S41A family.
   
  0.675
AMM40510.1
Glycosyl transferase.
    
 0.654
AMM40158.1
Polysaccharide export protein.
    
  0.610
pal
Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
    
 0.607
AMM41996.1
Flagellar motor protein MotB.
    
 0.607
AMM41539.1
Conserved hypothetical protein, secreted.
   
 
  0.603
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
Server load: low (28%) [HD]