STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIC60096.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)    
Predicted Functional Partners:
KIC60097.1
Nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.990
dnaE2
DNA polymerase III subunit alpha; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.
 
  
 0.978
dinB
DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
  
  
 0.630
sbcD
DNA repair exonuclease; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
      
 0.537
KIC60095.1
Hydroxyatrazine ethylaminohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.530
KIC59621.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.514
KIC57115.1
HNH endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.451
KIC59382.1
HNH endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.449
KIC57999.1
HNH endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.429
KIC57085.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.420
Your Current Organism:
Microbacterium hominis
NCBI taxonomy Id: 162426
Other names: CIP 105731, DSM 12509, IFO 15708, JCM 12413, LCDC 84-209, M. hominis, NBRC 15708, VKM Ac-2081
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.