STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYP82552.1Methylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the N(4)/N(6)-methyltransferase family. (226 aa)    
Predicted Functional Partners:
KYP82551.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KYP82550.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.631
sucC
succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
   
    0.545
KYP83133.1
DNA adenine methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.525
KYP82605.1
Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.508
lon
DNA-binding protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
     
 0.449
KYP82625.1
Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.423
KYP82590.1
Conjugal transfer protein TraI; Cleaves origin of transfer and unwinds; oriT relaxase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.421
sucD
succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
   
    0.412
KYP83721.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.412
Your Current Organism:
bacteria symbiont BFo1
NCBI taxonomy Id: 1628855
Other names: b. symbiont BFo1 of Frankliniella occidentalis, bacteria symbiont BFo1 of Frankliniella occidentalis, bacterium BFo1
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