STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000972495_05342Unannotated protein. (397 aa)    
Predicted Functional Partners:
GCA_000972495_05341
Unannotated protein.
 
     0.883
GCA_000972495_01194
Unannotated protein.
  
     0.773
GCA_000972495_04019
Unannotated protein.
  
     0.773
GCA_000972495_04550
Unannotated protein.
 
     0.746
GCA_000972495_04045
Unannotated protein.
  
     0.716
GCA_000972495_05028
Unannotated protein.
  
     0.703
GCA_000972495_04603
Unannotated protein.
  
     0.688
GCA_000972495_00319
Unannotated protein.
  
     0.685
GCA_000972495_02955
Unannotated protein.
  
   
 0.673
GCA_000972495_00411
Unannotated protein.
  
     0.657
Your Current Organism:
Hymenobacter terrenus
NCBI taxonomy Id: 1629124
Other names: H. terrenus, Hymenobacter sp. MIMtkLc17, Hymenobacter terrenus Tang et al. 2015, KCTC 42636, MCCC 1K00507, strain MIMtkLc17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.