Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEI94313.1 | rplK | SAMN05216514_10664 | SAMN05216514_10889 | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.854 |
| SEI94313.1 | rplQ | SAMN05216514_10664 | SAMN05216514_104143 | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Large subunit ribosomal protein L17. | 0.875 |
| SEI94313.1 | rplU | SAMN05216514_10664 | SAMN05216514_10231 | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.875 |
| SEI94313.1 | rplX | SAMN05216514_10664 | SAMN05216514_104126 | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.895 |
| SEI94313.1 | rpsQ | SAMN05216514_10664 | SAMN05216514_104124 | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.884 |
| SEI94313.1 | ybeY | SAMN05216514_10664 | SAMN05216514_1179 | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.848 |
| SEJ06111.1 | SEJ25462.1 | SAMN05216514_10956 | SAMN05216514_11710 | Phosphate starvation-inducible protein PhoH. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.510 |
| SEJ06111.1 | era | SAMN05216514_10956 | SAMN05216514_11711 | Phosphate starvation-inducible protein PhoH. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.582 |
| SEJ06111.1 | recO | SAMN05216514_10956 | SAMN05216514_11712 | Phosphate starvation-inducible protein PhoH. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.746 |
| SEJ06111.1 | ybeY | SAMN05216514_10956 | SAMN05216514_1179 | Phosphate starvation-inducible protein PhoH. | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.881 |
| SEJ25462.1 | SEJ06111.1 | SAMN05216514_11710 | SAMN05216514_10956 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Phosphate starvation-inducible protein PhoH. | 0.510 |
| SEJ25462.1 | era | SAMN05216514_11710 | SAMN05216514_11711 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.943 |
| SEJ25462.1 | recO | SAMN05216514_11710 | SAMN05216514_11712 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.846 |
| SEJ25462.1 | ybeY | SAMN05216514_11710 | SAMN05216514_1179 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.958 |
| era | SEJ06111.1 | SAMN05216514_11711 | SAMN05216514_10956 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Phosphate starvation-inducible protein PhoH. | 0.582 |
| era | SEJ25462.1 | SAMN05216514_11711 | SAMN05216514_11710 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.943 |
| era | recO | SAMN05216514_11711 | SAMN05216514_11712 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.922 |
| era | ybeY | SAMN05216514_11711 | SAMN05216514_1179 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.996 |
| recO | SEJ06111.1 | SAMN05216514_11712 | SAMN05216514_10956 | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | Phosphate starvation-inducible protein PhoH. | 0.746 |
| recO | SEJ25462.1 | SAMN05216514_11712 | SAMN05216514_11710 | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.846 |
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