STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aroCChorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. (410 aa)    
Predicted Functional Partners:
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
  
 0.998
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
 
 0.997
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
 
  
 0.991
trpE
Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]
 
 
 0.982
ANP28276.1
Chorismate mutase; TIGRFAM: CM_mono_cladeE: chorismate mutase; SMART: Chorismate mutase type II; Pfam: Chorismate mutase type II.
  
 
 0.972
ANP28311.1
Aminodeoxychorismate synthase, component I; Pfam: Glutamine amidotransferase class-I; PRINTS: Glutamine amidotransferase superfamily signature; PRINTS: Anthranilate synthase component II signature; Pfam: Anthranilate synthase component I, N terminal region; Pfam: chorismate binding enzyme; TIGRFAM: pabB: aminodeoxychorismate synthase, component I.
 
 
 0.958
ANP27039.1
Hypothetical protein; Pfam: chorismate binding enzyme.
 
  
 0.940
ANP27678.1
Pfam: ACT domain; Pfam: Prephenate dehydrogenase.
 
 
 0.930
ANP27617.1
Hypothetical protein; Pfam: Shikimate dehydrogenase substrate binding domain; Belongs to the shikimate dehydrogenase family.
 
  
 0.902
ANP28497.1
Hypothetical protein; TIGRFAM: trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; Pfam: Glutamine amidotransferase class-I; PRINTS: Carbamoyl-phosphate synthase protein GATase domain signature; PRINTS: Glutamine amidotransferase superfamily signature; PRINTS: Anthranilate synthase component II signature.
 
 
 0.887
Your Current Organism:
Dermabacter vaginalis
NCBI taxonomy Id: 1630135
Other names: D. vaginalis, DSM 100050, Dermabacter sp. AD1-86, Dermabacter vaginalis Chang et al. 2016, KCTC 39585, strain AD1-86
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