STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WD_0557Conserved hypothetical protein; Belongs to the UPF0335 family (88 aa)    
Predicted Functional Partners:
folD
Methylenetetrahydrofolate dehydrogenase (nadp+) / methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate
       0.864
ubiX
Phenylacrylic acid decarboxylase, 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
       0.864
WD_0558
CBS domain protein; Identified by similarity to GP:15075699; match to PF01595 protein family HMM PF01595; match to PF00571 protein family HMM PF00571; match to PF00571 protein family HMM PF00571; match to PF03471 protein family HMM PF03471
       0.849
WD_0128
Conserved hypothetical protein; Uncharacterized protein; Identified by similarity to GP:15075155
  
   
 0.775
WD_1176
Conserved hypothetical protein; Uncharacterized protein; Identified by similarity to EGAD:162748
  
     0.705
WD_0796
Conserved hypothetical protein; Uncharacterized protein; Identified by similarity to EGAD:163093
  
   
 0.667
recO
Dna repair protein reco (recombination protein o); Involved in DNA repair and RecF pathway recombination
  
     0.643
WD_1058
Glutathione s-transferase family protein; Identified by match to PF02798 protein family HMM PF02798
 
     0.629
Helicase
Atp-dependent helicase/nuclease subunit a; Belongs to the helicase family. UvrD subfamily
 
     0.612
WD_0870
Large subunit ribosomal protein l31; Belongs to the bacterial ribosomal protein bL31 family
  
     0.611
Your Current Organism:
Wolbachia sp. Dme
NCBI taxonomy Id: 163164
Other names: W. endosymbiont of Drosophila melanogaster, Wolbachia (endosymbiont of Drosophila melanogaster), Wolbachia endosymbiont of Drosophila melanogaster, Wolbachia pipientis wMel, Wolbachia sp. wMel
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