Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| WD_1283 | argD | WD_1283 | WD_0559 | Acetylornithine aminotransferase, putative; Identified by match to PF00202 protein family HMM PF00202; match to TIGR00707 protein family HMM TIGR00707 | Acetylornithine aminotransferase; Identified by similarity to EGAD:49428; match to PF00202 protein family HMM PF00202; match to TIGR00707 protein family HMM TIGR00707 | 0.818 |
| WD_1283 | dapD | WD_1283 | WD_0714 | Acetylornithine aminotransferase, putative; Identified by match to PF00202 protein family HMM PF00202; match to TIGR00707 protein family HMM TIGR00707 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family | 0.915 |
| WD_1283 | dapE | WD_1283 | WD_0788 | Acetylornithine aminotransferase, putative; Identified by match to PF00202 protein family HMM PF00202; match to TIGR00707 protein family HMM TIGR00707 | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls | 0.926 |
| argD | WD_1283 | WD_0559 | WD_1283 | Acetylornithine aminotransferase; Identified by similarity to EGAD:49428; match to PF00202 protein family HMM PF00202; match to TIGR00707 protein family HMM TIGR00707 | Acetylornithine aminotransferase, putative; Identified by match to PF00202 protein family HMM PF00202; match to TIGR00707 protein family HMM TIGR00707 | 0.818 |
| argD | aspC | WD_0559 | WD_1029 | Acetylornithine aminotransferase; Identified by similarity to EGAD:49428; match to PF00202 protein family HMM PF00202; match to TIGR00707 protein family HMM TIGR00707 | Aminotransferase; Identified by similarity to EGAD:163178; match to PF00155 protein family HMM PF00155 | 0.682 |
| argD | dapA | WD_0559 | WD_0775 | Acetylornithine aminotransferase; Identified by similarity to EGAD:49428; match to PF00202 protein family HMM PF00202; match to TIGR00707 protein family HMM TIGR00707 | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA) | 0.710 |
| argD | dapD | WD_0559 | WD_0714 | Acetylornithine aminotransferase; Identified by similarity to EGAD:49428; match to PF00202 protein family HMM PF00202; match to TIGR00707 protein family HMM TIGR00707 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family | 0.915 |
| argD | dapE | WD_0559 | WD_0788 | Acetylornithine aminotransferase; Identified by similarity to EGAD:49428; match to PF00202 protein family HMM PF00202; match to TIGR00707 protein family HMM TIGR00707 | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls | 0.969 |
| argD | dapF | WD_0559 | WD_1208 | Acetylornithine aminotransferase; Identified by similarity to EGAD:49428; match to PF00202 protein family HMM PF00202; match to TIGR00707 protein family HMM TIGR00707 | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan | 0.701 |
| argD | murF | WD_0559 | WD_1128 | Acetylornithine aminotransferase; Identified by similarity to EGAD:49428; match to PF00202 protein family HMM PF00202; match to TIGR00707 protein family HMM TIGR00707 | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein | 0.604 |
| asd | aspC | WD_0954 | WD_1029 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate | Aminotransferase; Identified by similarity to EGAD:163178; match to PF00155 protein family HMM PF00155 | 0.764 |
| asd | dapA | WD_0954 | WD_0775 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA) | 0.980 |
| asd | dapB | WD_0954 | WD_0370 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate | 4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate | 0.788 |
| asd | dapD | WD_0954 | WD_0714 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family | 0.964 |
| asd | dapE | WD_0954 | WD_0788 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls | 0.666 |
| asd | dapF | WD_0954 | WD_1208 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan | 0.762 |
| aspC | argD | WD_1029 | WD_0559 | Aminotransferase; Identified by similarity to EGAD:163178; match to PF00155 protein family HMM PF00155 | Acetylornithine aminotransferase; Identified by similarity to EGAD:49428; match to PF00202 protein family HMM PF00202; match to TIGR00707 protein family HMM TIGR00707 | 0.682 |
| aspC | asd | WD_1029 | WD_0954 | Aminotransferase; Identified by similarity to EGAD:163178; match to PF00155 protein family HMM PF00155 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate | 0.764 |
| aspC | dapA | WD_1029 | WD_0775 | Aminotransferase; Identified by similarity to EGAD:163178; match to PF00155 protein family HMM PF00155 | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA) | 0.866 |
| aspC | dapB | WD_1029 | WD_0370 | Aminotransferase; Identified by similarity to EGAD:163178; match to PF00155 protein family HMM PF00155 | 4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate | 0.613 |
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