STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001049915_02433Unannotated protein. (290 aa)    
Predicted Functional Partners:
GCA_001049915_02589
Unannotated protein.
  
 0.938
GCA_001049915_01732
Unannotated protein.
  
 
 0.908
GCA_001049915_01467
Unannotated protein.
   
 0.492
GCA_001049915_00855
Unannotated protein.
  
 
  0.488
GCA_001049915_01617
Unannotated protein.
    
 0.479
GCA_001049915_01129
Unannotated protein.
  
 
 0.462
GCA_001049915_00939
Unannotated protein.
    
 0.451
GCA_001049915_01356
Unannotated protein.
     
 0.428
GCA_001049915_01067
Unannotated protein.
  
 
 0.423
GCA_001049915_00326
Unannotated protein.
    
 0.409
Your Current Organism:
Drancourtella massiliensis
NCBI taxonomy Id: 1632013
Other names: CSUR P1506, D. massiliensis, DSM 100357, Ruminococcaceae bacterium GD1, strain GD1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.