STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001375675_00783Unannotated protein. (251 aa)    
Predicted Functional Partners:
GCA_001375675_01178
Unannotated protein.
  
 
  0.804
GCA_001375675_02808
Unannotated protein.
  
 
  0.705
GCA_001375675_01293
Unannotated protein.
 
     0.550
GCA_001375675_01838
Unannotated protein.
   
 
  0.513
GCA_001375675_01425
Unannotated protein.
 
     0.512
GCA_001375675_01046
Unannotated protein.
    
  0.476
GCA_001375675_02061
Unannotated protein.
    
  0.475
GCA_001375675_02210
Unannotated protein.
    
  0.469
GCA_001375675_02038
Unannotated protein.
    
  0.468
GCA_001375675_02570
Unannotated protein.
    
  0.468
Your Current Organism:
Massilibacterium senegalense
NCBI taxonomy Id: 1632858
Other names: Bacillaceae bacterium mt8, CSUR P1510, DSM 100455, M. senegalense, strain mt8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.