STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
czcSSensor protein CzcS precursor. (479 aa)    
Predicted Functional Partners:
copR_3
Transcriptional activator protein CopR.
  0.996
copR_2
Transcriptional activator protein CopR.
 
  0.982
barA_4
Signal transduction histidine-protein kinase BarA.
  
 
0.947
tmoS_3
Sensor histidine kinase TmoS.
 
 
0.931
cusS_2
Sensor kinase CusS.
  
  
 
0.927
barA_1
Signal transduction histidine-protein kinase BarA.
 
 
0.926
barA_2
Signal transduction histidine-protein kinase BarA.
 
 
0.916
phoR_3
Alkaline phosphatase synthesis sensor protein PhoR.
 
 
0.839
czcR
Transcriptional activator protein CzcR.
 
   0.837
arlR_1
Response regulator ArlR.
 
   0.836
Your Current Organism:
Planctomyces sp. SHPL14
NCBI taxonomy Id: 1632864
Other names: P. sp. SH-PL14, Planctomyces sp. SH-PL14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.