STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XE01_1296Major facilitator superfamily MFS_1. (302 aa)    
Predicted Functional Partners:
XE01_0323
Outer membrane efflux protein.
   
 
 0.642
XE01_0068
Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 0.628
XE01_1297
Cupin 2 conserved barrel domain protein.
       0.598
XE01_1295
Nitroreductase.
    
 0.580
XE01_0630
Thiamine pyrophosphate protein TPP binding domain protein; Belongs to the TPP enzyme family.
     
 0.569
XE01_0947
Thiamine pyrophosphate protein central region; Belongs to the TPP enzyme family.
     
 0.569
XE01_1294
Diguanylate cyclase.
       0.533
thyX
Thymidylate synthase ThyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.
    
  0.532
XE01_1333
Major facilitator superfamily MFS_1.
  
 
 0.451
XE01_0372
Integral membrane sensor signal transduction histidine kinase.
     
 0.450
Your Current Organism:
Synergistales bacterium 5881
NCBI taxonomy Id: 1635274
Other names: S. bacterium 58_81, Synergistales bacterium 58_81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.