STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD60_0394Ribosome biogenesis GTP-binding protein YsxC. (133 aa)    
Predicted Functional Partners:
XD60_0397
Glutaredoxin-like domain protein.
 
     0.645
XD60_0470
ATP-citrate lyase/succinyl-CoA ligase.
    
  0.620
XD60_1715
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
    
  0.613
XD60_0396
Glutaredoxin-like protein, YruB-family.
       0.556
XD60_0395
Arsenate reductase.
  
    0.552
XD60_0622
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase.
    
  0.424
XD60_1260
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA.
    
 0.420
XD60_1518
Dihydrolipoyl dehydrogenase.
    
 0.420
Your Current Organism:
Acetothermia bacterium 6432
NCBI taxonomy Id: 1635286
Other names: A. bacterium 64_32, Acetothermia bacterium 64_32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.