STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD60_0654Hypothetical protein. (437 aa)    
Predicted Functional Partners:
XD60_0655
DNA polymerase III subunit alpha.
       0.797
XD60_0657
Enolase.
  
    0.797
XD60_0656
Hypothetical protein.
       0.773
XD60_0653
DNA polymerase beta domain protein region.
       0.752
XD60_0486
DNA topoisomerase.
   
   0.736
XD60_1053
Hypothetical protein.
    
 0.725
XD60_0652
HEPN domain protein.
       0.574
XD60_0431
Cold shock protein.
   
 
  0.560
XD60_0658
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein.
       0.513
XD60_0303
Bifunctional protein GlmU.
 
   
 0.504
Your Current Organism:
Acetothermia bacterium 6432
NCBI taxonomy Id: 1635286
Other names: A. bacterium 64_32, Acetothermia bacterium 64_32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.