STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000971235_01765Unannotated protein. (145 aa)    
Predicted Functional Partners:
GCA_000971235_01764
Unannotated protein.
  
    0.807
GCA_000971235_01766
Unannotated protein.
  
   0.694
GCA_000971235_00791
Unannotated protein.
  
     0.580
GCA_000971235_01004
Unannotated protein.
 
     0.579
GCA_000971235_01005
Unannotated protein.
  
     0.575
GCA_000971235_01740
Unannotated protein.
  
     0.504
GCA_000971235_01501
Unannotated protein.
 
     0.495
GCA_000971235_01733
Unannotated protein.
  
     0.487
GCA_000971235_01716
Unannotated protein.
  
     0.440
GCA_000971235_01453
Unannotated protein.
  
     0.431
Your Current Organism:
Lysinimicrobium subtropicum
NCBI taxonomy Id: 1638989
Other names: DSM 28145, L. subtropicum, Lysinimicrobium sp. HI12-128, Lysinimicrobium sp. NBRC 109396, Lysinimicrobium subtropicum Hamada et al. 2015, NBRC 109396, strain HI12-128
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.