STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT73658.1Monooxygenase. (300 aa)    
Predicted Functional Partners:
KRT73657.1
acyl-CoA dehydrogenase.
    
  0.812
KRT73655.1
Medium-chain fatty-acid-CoA ligase, fatty-acyl-CoA synthase.
       0.763
KRT73656.1
Hypothetical protein.
  
    0.763
KRT73248.1
Luciferase-like protein monooxygenase.
  
     0.762
KRT71611.1
Luciferase-like protein.
  
     0.760
KRT65170.1
Coenzyme F420-0 gamma-glutamyl ligase, coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase.
 
   
 0.760
KRT73826.1
Flavin reductase domain-containing protein.
 
 
 0.749
KRT73660.1
3-hydroxyisobutyrate dehydrogenase.
     
 0.716
KRT73659.1
Peptidase M24.
       0.714
KRT71900.1
NADPH-dependent F420 reductase.
 
    0.665
Your Current Organism:
Rokubacteria bacterium CSP16
NCBI taxonomy Id: 1640509
Other names: C. Rokubacteria bacterium CSP1-6, Candidatus Rokubacteria bacterium CSP1-6, bacterium CSP1-6
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