STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT71956.1ATPase P, Cu2+-exporting ATPase. (844 aa)    
Predicted Functional Partners:
copA
Cu(2+)-binding/translocating P-type ATPase, Cu2+-exporting ATPase.
 
0.995
KRT71955.1
Copper-translocating P-type ATPase.
  
 0.961
KRT72682.1
Dioxygenase, ferredoxin subunit.
   
 0.950
KRT73116.1
Multicopper oxidase type 3.
 
 
 0.893
KRT71957.1
Hypothetical protein.
       0.776
KRT71958.1
Hypothetical protein.
       0.752
fdxB
2Fe-2S ferredoxin, ferredoxin, 2Fe-2S.
    
 0.713
KRT73032.1
Multi-sensor signal transduction histidine kinase.
  
 
 0.697
KRT71612.1
Histidine kinase.
  
 
 0.697
KRT66104.1
Histidine kinase.
  
 
 0.693
Your Current Organism:
Rokubacteria bacterium CSP16
NCBI taxonomy Id: 1640509
Other names: C. Rokubacteria bacterium CSP1-6, Candidatus Rokubacteria bacterium CSP1-6, bacterium CSP1-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.