STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT64278.1IclR family transcriptional regulator. (256 aa)    
Predicted Functional Partners:
KRT64246.1
Gluconolactonase.
      0.908
KRT63953.1
Allophanate hydrolase 2 subunit 1.
  
    0.832
KRT63952.1
Allophanate hydrolase subunit 2.
  
    0.809
KRT63572.1
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
  
  
  0.709
KRT63671.1
2-hydroxy-3-oxopropionate reductase.
  
  
  0.609
metF
5,10-methylenetetrahydrofolate reductase, methylenetetrahydrofolate reductase (NADPH).
 
     0.604
aceB
Malate synthase, malate synthase; Belongs to the malate synthase family.
    
 0.602
gltA
Citrate synthase I GltA2, citrate synthase; Belongs to the citrate synthase family.
    
  0.594
KRT62312.1
Putative oxidoreductase.
    
  0.583
KRT62538.1
Go, peroxisomal (S)-2-hydroxy-acid oxidase-like protein.
  
 
 0.575
Your Current Organism:
Chloroflexi bacterium CSP14
NCBI taxonomy Id: 1640513
Other names: C. bacterium CSP1-4, Chloroflexi bacterium CSP1-4
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