STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT64285.1Extracellular solute-binding protein, putative spermidine/putrescine transport system substrate-binding protein. (374 aa)    
Predicted Functional Partners:
KRT64286.1
ABC transporter permease, putative spermidine/putrescine transport system permease protein.
 
 
 0.977
KRT64287.1
Binding-protein-dependent transport system inner membrane protein, putative spermidine/putrescine transport system permease protein.
 
 
  0.977
potA-2
Spermidine/putrescine ABC transporter ATPase; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 0.959
KRT64267.1
Multi-sensor hybrid histidine kinase.
    
 0.753
KRT60329.1
ABC transporter-like protein.
 
 
  0.712
KRT64284.1
Proline/glycine betaine ABC transporter periplasmic component-like protein.
  
    0.678
KRT62290.1
Iron permease FTR1, high-affinity iron transporter.
  
  
 0.641
KRT64449.1
Major facilitator transporter.
  
  
 0.623
potA
Putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.618
potA-3
Spermidine/putrescine ABC transporter ATPase; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.618
Your Current Organism:
Chloroflexi bacterium CSP14
NCBI taxonomy Id: 1640513
Other names: C. bacterium CSP1-4, Chloroflexi bacterium CSP1-4
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