STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT62280.1NADH ubiquinone oxidoreductase, 20 kDa subunit. (179 aa)    
Predicted Functional Partners:
KRT62278.1
Ech hydrogenase subunit EchE, ech hydrogenase subunit E.
 0.999
KRT62282.1
NADH dehydrogenase (quinone).
 
 0.999
echB
Hydrogenase-4 component C.
 
 0.998
KRT64623.1
NADH dehydrogenase, NADH-quinone oxidoreductase subunit F.
  
 0.986
KRT62905.1
NADPH-dependent glutamate synthase beta chain-like protein oxidoreductase.
  
 0.974
KRT62279.1
Ech hydrogenase, subunit EchD, ech hydrogenase subunit D.
 
     0.945
nuoD
NADH dehydrogenase I subunit D, NADH-quinone oxidoreductase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
 
  
  0.896
KRT61079.1
Nitrate reductase, formate dehydrogenase, alpha subunit.
 
 0.852
KRT64619.1
NADH (or F420H2) dehydrogenase subunit C, NADH-quinone oxidoreductase subunit C.
 
 
 0.848
KRT64624.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase, formate dehydrogenase, alpha subunit.
  
 0.848
Your Current Organism:
Chloroflexi bacterium CSP14
NCBI taxonomy Id: 1640513
Other names: C. bacterium CSP1-4, Chloroflexi bacterium CSP1-4
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