STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT68342.1Hypothetical protein. (331 aa)    
Predicted Functional Partners:
KRT68343.1
Outer membrane lipoprotein Slp, outer membrane lipoprotein.
       0.714
KRT68344.1
Hypothetical protein.
       0.709
ybbA
Transporter subunit: ATP-binding component of ABC superfamily.
       0.709
KRT68346.1
Periplasmic component of efflux system, HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.684
KRT68347.1
Hypothetical protein.
       0.555
KRT68348.1
Hypothetical protein.
       0.555
KRT68349.1
RNA polymerase sigma-H factor (Sigma-30); Belongs to the sigma-70 factor family. ECF subfamily.
       0.555
KRT68341.1
Hypothetical protein.
       0.468
KRT68340.1
Hypothetical protein.
       0.424
Your Current Organism:
candidate division NC10 bacterium CSP15
NCBI taxonomy Id: 1640516
Other names: c. division NC10 bacterium CSP1-5, candidate division NC10 bacterium CSP1-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.