STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD89_0947Putative methylmalonyl-CoA epimerase. (91 aa)    
Predicted Functional Partners:
XD89_0948
Putative isobutyryl-CoA mutase.
    
 0.911
XD89_0428
Carboxyl transferase.
  
 
 0.901
XD89_0376
Putative isobutyryl-CoA mutase.
   
 0.860
XD89_0335
Pyruvate-flavodoxin oxidoreductase.
    
  0.817
XD89_0965
Pyruvate-flavodoxin oxidoreductase.
    
  0.817
XD89_0426
Biotin/lipoyl attachment domain-containing protein.
  
 
 0.777
XD89_0258
Putative isobutyryl-CoA mutase.
    
 0.677
XD89_0681
Lactoylglutathione lyase and related lyase.
    
 0.673
XD89_0304
Aminotransferase.
   
 
 0.660
XD89_0870
Putative aspartate aminotransferase.
   
 
 0.660
Your Current Organism:
Anaerolineae bacterium 4920
NCBI taxonomy Id: 1641376
Other names: A. bacterium 49_20, Anaerolineae bacterium 49_20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.