STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM55416.1Heparinase II/III-like protein {ECO:0000313|EMBL:EEZ22509,1}; tr|D1K1U5|D1K1U5_9BACE;evalue=0.0; PctID=52.98; score=827. (762 aa)    
Predicted Functional Partners:
SCM58789.1
Glycosyl Hydrolase Family 88 family protein {ECO:0000313|EMBL:KDS17365,1}; tr|A0A078Q2J1|A0A078Q2J1_BACFG, tr|D6D8J1|D6D8J1_9BACE, tr|I9UR52|I9UR52_9BACE;evalue=2e-178; PctID=75.13; score=632.
 
 
 0.805
ugl1
Unsaturated glucuronyl hydrolase; Catalyzes the hydrolysis of oligosaccharides with unsaturated glucuronyl residues at the non-reducing terminal, to a sugar or an amino sugar, and an unsaturated D-glucuronic acid (GlcA), which is nonenzymatically converted immediately to alpha-keto acid. Glcp-(1->4)-alpha-L-Rhap-(1->3)-beta-D-Glcp + H(2)O = 5-dehydro-4-deoxy-D-glucuronate + beta-D-Glcp-(1->4)-alpha-L-Rhap-(1->3)-beta-D-Glcp. as calcium, copper, iron and mercury. Kinetic parameters: KM=0.381 mM for unsaturated chondroitin disaccharidee (delta0S); KM=18.6 mM for unsaturated chondroitin d [...]
 
 
 0.654
SCM55415.1
Hypothetical protein.
       0.651
SCM58790.1
Putative protein {ECO:0000313|EMBL:EGM99635,1}; tr|F7LFW9|F7LFW9_BACOV;evalue=8e-145; PctID=59.71; score=520.
  
     0.611
SCM59077.1
Putative protein {ECO:0000313|EMBL:EGK00129,1}; tr|F5J2G9|F5J2G9_9PORP;evalue=0.0; PctID=57.50; score=1308.
 
 
 0.605
SCM55417.1
Phosphatase; Required for cell cycle progression. Has a role in the completion of START. P32361:IRE1; NbExp=2; IntAct=EBI-3669144, EBI-9364; medium; sp|Q05924|DCR2_YEAST;evalue=4e-024; PctID=30.37; score=112.
       0.601
SCM59048.1
Putative protein {ECO:0000313|EMBL:ETZ23774,1}; tr|W6U2D5|W6U2D5_9SPHI;evalue=0.0; PctID=55.47; score=1122.
 
 
 0.555
SCM58877.1
Putative protein {ECO:0000313|EMBL:EEC96123,1}; tr|B7BBU7|B7BBU7_9PORP;evalue=0.0; PctID=64.92; score=1340.
 
 
 0.541
SCM56507.1
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:BAR48036,1}; tr|A0A0E4BBX1|A0A0E4BBX1_TANFO;evalue=0.0; PctID=65.24; score=1313.
 
 
 0.511
SCM59192.1
Putative protein {ECO:0000313|EMBL:KEJ84406,1}; tr|A0A073I4L8|A0A073I4L8_9PORP, tr|A0A078SCW7|A0A078SCW7_9PORP,tr|D0TI48|D0TI48_9BACE; evalue=0.0; PctID=60.48; score=1311.
 
 
 0.495
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.