STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM59732.1Protein TonB {ECO:0000256|RuleBase:RU362123}; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (231 aa)    
Predicted Functional Partners:
SCM59738.1
Putative protein {ECO:0000313|EMBL:CEA16383,1}; tr|A0A098C1U3|A0A098C1U3_9PORP;evalue=7e-062; PctID=60.29; score=243.
 
 
 0.952
SCM59739.1
Putative protein {ECO:0000313|EMBL:CEA16382,1}; tr|A0A098C3A0|A0A098C3A0_9PORP;evalue=7e-059; PctID=80.14; score=232.
 
 
 0.949
SCM59736.1
Putative biopolymer transport protein ExbB homolog; sp|O27101|Y1022_METTH;evalue=9e-015; PctID=30.89; score=80.9.
 
 
 0.912
SCM56760.1
Putative protein {ECO:0000313|EMBL:CEA16324,1}; tr|A0A098C077|A0A098C077_9PORP;evalue=1e-051; PctID=77.04; score=207.
 
 
 0.816
SCM56762.1
Transporter, MotA/TolQ/ExbB proton channel family protein {ECO:0000313|EMBL:CEA16323,1}; tr|A0A098C1N0|A0A098C1N0_9PORP;evalue=2e-079; PctID=71.17; score=301.
 
 
 0.783
SCM59281.1
TPR domain-containing protein {ECO:0000313|EMBL:CEA17134,1}; tr|A0A098C2J2|A0A098C2J2_9PORP;evalue=0.0; PctID=70.70; score=674.
 
   
 0.725
SCM59747.1
Putative protein {ECO:0000313|EMBL:CEA15500,1}; tr|A0A098BXW6|A0A098BXW6_9PORP;evalue=7e-113; PctID=63.67; score=413.
 
  
 0.706
SCM59273.1
Membrane protein {ECO:0000313|EMBL:KGN81250,1}; tr|A0A0A2EUT6|A0A0A2EUT6_PORCN;evalue=0.0; PctID=63.44; score=1053.
 
 
 0.691
SCM55652.1
TonB-dependent receptor {ECO:0000313|EMBL:GAD04348,1}; tr|S4N6I9|S4N6I9_9PORP;evalue=2e-090; PctID=45.19; score=341.
 
 
 0.631
susC1
TonB-dependent receptor SusC; Mediates transport of starch oligosaccharides from the surface of the outer membrane to the periplasm for subsequent degradation. pass membrane protein Sequence=AAA95938.1; Type=Frameshift; Positions=374, 380, 714, 724, 745; Evidence=; sp|Q8A1G1|SUSC_BACTN;evalue=2e-048; PctID=40.50; score=195.
 
 
 0.606
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.