STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3G6G2_PHYRMFatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (253 aa)    
Predicted Functional Partners:
H3GMY4_PHYRM
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.994
H3G5V4_PHYRM
Uncharacterized protein.
   
 0.985
H3GT45_PHYRM
Uncharacterized protein.
  
 0.904
H3GL90_PHYRM
Epimerase domain-containing protein.
   
 0.901
H3HBH7_PHYRM
RmlD_sub_bind domain-containing protein.
   
 0.901
H3G8G0_PHYRM
Uncharacterized protein.
   
 0.859
H3GGY9_PHYRM
Uncharacterized protein.
    
 0.849
H3GM42_PHYRM
Uncharacterized protein.
    
 0.849
H3GJZ8_PHYRM
Uncharacterized protein.
   
 0.836
H3GGX4_PHYRM
Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6.
   
 0.740
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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