STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3G8I8_PHYRMCHCH domain-containing protein. (153 aa)    
Predicted Functional Partners:
H3GIG2_PHYRM
Uncharacterized protein.
   
   0.633
H3GII1_PHYRM
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
    0.581
H3HBY0_PHYRM
Uncharacterized protein.
   
 
 0.452
H3G6N7_PHYRM
RRM domain-containing protein.
    
  0.441
H3G796_PHYRM
Uncharacterized protein.
    
  0.441
H3GD55_PHYRM
Uncharacterized protein.
    
  0.441
H3GDF9_PHYRM
Uncharacterized protein.
    
  0.441
H3GFJ8_PHYRM
RRM domain-containing protein.
    
  0.441
H3GGA3_PHYRM
Uncharacterized protein.
    
  0.441
H3GHD2_PHYRM
RRM domain-containing protein.
    
  0.441
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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