STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3G9Y3_PHYRMProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (305 aa)    
Predicted Functional Partners:
H3GBD3_PHYRM
CYCLIN domain-containing protein; Belongs to the cyclin family.
    
 0.964
H3GLZ6_PHYRM
RING-type domain-containing protein.
    
 0.964
H3GBC5_PHYRM
Uncharacterized protein.
    
 0.962
H3G601_PHYRM
General transcription factor IIH subunit.
    
 0.957
H3GAU9_PHYRM
Uncharacterized protein.
    
 0.957
H3HDA4_PHYRM
BSD domain-containing protein.
    
 0.957
H3GUR6_PHYRM
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.954
H3H4V0_PHYRM
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
  
 
0.936
H3H3L2_PHYRM
Uncharacterized protein.
     
 
0.932
H3G8C6_PHYRM
Helicase ATP-binding domain-containing protein.
    
 0.922
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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