STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GAN8_PHYRMUncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (275 aa)    
Predicted Functional Partners:
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.611
H3GA10_PHYRM
Uncharacterized protein; Belongs to the FGGY kinase family.
 
 
 0.568
H3GSY7_PHYRM
Uncharacterized protein.
   
 0.568
H3H4I2_PHYRM
FGGY_N domain-containing protein.
   
 0.568
H3H7A1_PHYRM
Uncharacterized protein.
   
 0.568
H3HD73_PHYRM
Uncharacterized protein.
   
 0.568
H3HEF7_PHYRM
HTH CENPB-type domain-containing protein.
   
 0.568
H3GG74_PHYRM
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.567
H3G4Y1_PHYRM
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.555
H3G801_PHYRM
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.555
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.