STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GEA7_PHYRMRWD domain-containing protein. (251 aa)    
Predicted Functional Partners:
H3G882_PHYRM
OBG-type G domain-containing protein.
   
 
 0.985
H3GAY8_PHYRM
OBG-type G domain-containing protein.
   
 
 0.945
H3GH83_PHYRM
Uncharacterized protein.
   
 
 0.666
H3H0X3_PHYRM
Uncharacterized protein.
   
 
 0.666
H3G4Z2_PHYRM
C3H1-type domain-containing protein.
   
 
 0.622
H3GH31_PHYRM
NUC153 domain-containing protein.
   
   0.566
H3GZH1_PHYRM
TOG domain-containing protein.
    
 
 0.565
H3GGX5_PHYRM
SUI1 domain-containing protein.
   
    0.506
H3GT42_PHYRM
Uncharacterized protein; Belongs to the BCP1 family.
   
    0.499
H3HCW5_PHYRM
RRM domain-containing protein.
   
    0.471
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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