STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GPI8_PHYRMUncharacterized protein. (275 aa)    
Predicted Functional Partners:
H3GA96_PHYRM
Uncharacterized protein.
   
 
 0.951
H3G8B2_PHYRM
Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.
 
  
  0.935
H3GQP5_PHYRM
ATP-synt_ab domain-containing protein.
   
 
 0.932
H3G8T8_PHYRM
Uncharacterized protein.
   
 
 0.930
H3G7K5_PHYRM
Uncharacterized protein; Belongs to the V-ATPase proteolipid subunit family.
   
 
 0.922
H3G6Z2_PHYRM
Uncharacterized protein.
   
 
  0.918
H3GB02_PHYRM
Uncharacterized protein.
   
 
 0.917
H3G4Y7_PHYRM
Plasma membrane ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily.
     
 0.913
H3GAT6_PHYRM
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
   
 
 0.910
H3GYT2_PHYRM
Uncharacterized protein.
  
  
 
0.905
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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