STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3H4C9_PHYRMAa_trans domain-containing protein. (501 aa)    
Predicted Functional Partners:
H3GWU9_PHYRM
Uncharacterized protein.
   
 0.601
H3G783_PHYRM
Uncharacterized protein.
    
 0.568
H3GL81_PHYRM
Uncharacterized protein.
    
 0.518
H3GPA3_PHYRM
Uncharacterized protein.
    
 0.518
H3G7T0_PHYRM
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.512
H3GAT6_PHYRM
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
    
  0.483
H3GG74_PHYRM
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.446
H3H4D1_PHYRM
Uncharacterized protein.
 
  
   0.442
H3GAF7_PHYRM
WD_REPEATS_REGION domain-containing protein.
    
  0.432
H3H3N0_PHYRM
Uncharacterized protein.
    
  0.421
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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